Journal article

A machine-learning framework for robust and reliable prediction of short- and long-term treatment response in initially antipsychotic-naïve schizophrenia patients based on multimodal neuropsychiatric data

KS Ambrosen, MW Skjerbæk, J Foldager, MC Axelsen, N Bak, L Arvastson, SR Christensen, LB Johansen, JM Raghava, B Oranje, E Rostrup, M Nielsen, M Osler, B Fagerlund, C Pantelis, BJ Kinon, BY Glenthøj, LK Hansen, BH Ebdrup

Translational Psychiatry | NATURE PUBLISHING GROUP | Published : 2020

Abstract

The reproducibility of machine-learning analyses in computational psychiatry is a growing concern. In a multimodal neuropsychiatric dataset of antipsychotic-naïve, first-episode schizophrenia patients, we discuss a workflow aimed at reducing bias and overfitting by invoking simulated data in the design process and analysis in two independent machine-learning approaches, one based on a single algorithm and the other incorporating an ensemble of algorithms. We aimed to (1) classify patients from controls to establish the framework, (2) predict short- and long-term treatment response, and (3) validate the methodological framework. We included 138 antipsychotic-naïve, first-episode schizophrenia..

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University of Melbourne Researchers

Grants

Awarded by National Health and Medical Research Council


Funding Acknowledgements

We gratefully acknowledge the great effort of all participants in the study and of our colleagues at the Centre for Neuropsychiatric Schizophrenia Research (CNSR) and Centre for Clinical Intervention and Neuropsychiatric Schizophrenia Research (CINS). This study was supported by H. Lundbeck A/S and by grants from the Lundbeck Foundation (ID: R25-A2701 and ID: R155-2013-16337). C.P. was supported by an NHMRC Senior Principal Research Fellowship (ID: 1105825) and by a grant from the Lundbeck Foundation (ID: R246-2016-3237).